Peptide analysis

The study of peptides is relevant to many research questions. Peptidomics enables the discovery of essential biomarkers for biological conditions or processes. Epitopes and allergens are common peptide targets for peptide studies.

Peptidomics has become a particularly strong tool in the analysis of protein processing and modification. Peptidomics is ideal for identifying degradation patterns from biological processes, truncation of the protein sequence, and amino acid changes during translation. With peptidomics, you can identify the events of interest and quantify the changes to investigate how mutations or cellular perturbations alter the proteomic landscapes at the peptide level.

You can choose peptidomics for a stand-alone study or as an addition to regular proteomic studies. If you’d like to learn more, we are happy to discuss your project and help you get the most out of your peptide analysis.

Let’s discuss your project

Guiding you from sample to biology

Our experts are ready to help you with your peptidomics research. Ideally, we set up an online meeting where we get to learn about your project. Here, we discuss the different options to reach your aim.

Get a price estimate within 24 hours

If you need an estimate for your project, we are happy to help. We encourage you to request an initial free consultation to assess which proteomics approach fits your research aim.

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Sample preparation and sample analysis

Customized sample preparation for peptidomics

Biogenity’s team is experienced in working with different approaches for peptidomics, and we always offer a free consultation to discuss which workflows fit your research aim. At Biogenity, we care, which is why it is essential for us to understand your study to ensure that we provide you with the best approach for your research.

Experienced professionals

Biogenity’s team and partners consist of a group of specialized personnel ensuring your samples get quality handling. We provide partial and complete sample preparation workflows and happily share protocols for transparency or in-house sample preparation. However, we always recommend that Biogenity does most of the sample preparation to reduce variance.

The latest mass spectrometers

We pride ourselves on offering some of the best equipment on the market. Our collaborating proteomics laboratory has some of the latest equipment from Thermo Fisher Scientific, ensuring a deep coverage. If you’d like to see the complete platform list, follow this link.

The right equipment for the job

The Orbitrap Exploris 480 combined with FAIMS and Evosep provides a fast and robust workflow, enabling us to monitor up to 150 peptides with our targeted workflows and more than 50,000 peptides in our discovery approaches.

Data analysis, including report, figures, and tables

From the discovery of biomarkers to the validation of peptides

Data analysis is where you get the overview of your parasite-based proteome analysis. You will receive an easy-to-follow report describing the data analysis and results hereof, step-by-step, together with a folder containing all tables and figures. To ensure that you have the material needed, we always provide a vast number of figures and tables.

Let us be your data scientist

Biogenity’s data analysis can be tailored to different research aims, from machine learning and statistics on biomarkers to validating peptide spectra, uncovering new mutations, and establishing degradation motifs. We always strive to provide you with the right tools to understand the data and communicate your findings.

Download DEMO

Delivery and discussion

Delivered directly to your inbox

When your peptidomics analysis is ready, we deliver it directly to your inbox. Your data and reports are easy to access and secured with encryption and password protection.

You can receive your sample leftovers sent by courier, or Biogenity can safely destroy them after project completion. It is entirely up to you.

Plant a tree with Biogenity and One Tree Planted

Partnering with One Tree Planted, we want to work towards a brighter future with better treatment for diseases and a healthy planet to enjoy life. For us, our children, grandchildren, and the generations to come.

Biogenity donates a dozen trees for every project delivered to support local communities, reforestation in the Amazon rainforest, and reduce CO2 emissions. See how we are making a difference together.

Post-consultation and discussion

It is important to us that you get the most out of your peptidomics experiment, which is why we always offer a post-consultation where you can ask all your questions about the results. Together, we ensure that you have the best prerequisite for your further research. The consultation can also be used to explore the next step, whether you are looking to expand the project with additional omics studies or validate the results.

What you can expect:

  • Explanation of the different steps in the sample analysis
  • Discussion of the data
  • Explanation of the different steps in the data analysis
  • Q&A to the report

Other proteomics LC-MS/MS approaches

Discovery-based proteomics


Biogenity offers global protein analysis of your samples, getting deep proteome coverages with state-of-the-art accuracy.

Discovery-based proteomics


Are you investigating epitopes? Biogenity's immunopeptidomics workflows aim to identify the peptides bound on Major Histocompatibility Complexes (MHC).



Biogenity's degradomics workflows are ideal if you want to investigate or identify protease activity or cleavages sites.

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