Metabolomics Services

Precision Metabolomics Services

Metabolomics provides a powerful lens into the biochemical state of living systems. By studying small molecules, metabolites, we can reveal how cells respond to their environment, how pathways are regulated, and how disease alters metabolism.

At Biogenity, we help you explore the metabolome with complete workflows that span from sample preparation to data analysis. Our focus is on quality, interpretability, and reproducibility, ensuring your results are ready for documentation, publications, and presentations.

If you’d like to learn more, we are happy to discuss your project and help you get the most out of your metabolomics analysis.

Let’s discuss your project

>1,000 metabolites
detected across targeted and untargeted studies

High-resolution LC–MS & GC–MS
for precise, reproducible metabolite profiling

Validated workflows
ensuring consistent quality and publication-ready data

Guiding you from sample to biology

Our specialists work with you from the start to design the optimal analytical approach for your research question.

In an online consultation, we discuss your study design, sample types, and biological aims to help you select the most suitable workflows and techniques.

Get a project estimate

We provide tailored cost estimates and timelines based on your experimental setup. Schedule a free consultation to discuss your analytical strategy and receive a personalized project outline.

Consultation
Sample preparation
Sample analysis
Data analysis
Delivery
Discussion of analysis

Tailored workflows for metabolomics

Metabolomics can uncover many layers of biology, but each study has unique requirements. We guide you through the options to identify the workflow best suited to your goals. Our Standard Operating Procedures (SOPs) are transparent and fully documented, allowing you to replicate or extend your experiments with confidence.

Supported matrices include

Biological fluids: plasma, serum, urine, saliva, cerebrospinal fluid
Cells and tissues: cultured cells, tissue biopsies, microbial or plant extracts
Specialized matrices: cell media, food and feed, feces and gut, supernatants
Model systems: clinical, nutritional, and environmental studies

High-coverage metabolomics for targeted and untargeted studies

Biogenity offers multiple analytical paths depending on your study’s focus. We perform both targeted and untargeted metabolomics, balancing precision and discovery to deliver comprehensive metabolic insights.

Targeted metabolomics precisely quantifies key metabolite groups such as amino acids, bile acids, and lipids.

Untargeted metabolomics provides broad system coverage, detecting hundreds to thousands of metabolic features to uncover new patterns and pathway dynamics.

Lipid Metabolism

Targeted lipidomics of fatty acids, phospholipids, sphingolipids, lipid mediators, bile acids, sterols, triglycerides and PFAS by LC–MS/MS and GC–MS/MS.

Amino Acid and Energy Metabolism

Targeted analysis of amino acids, acylcarnitines and TCA intermediates, central to energy metabolism, protein turnover and cellular regulation.

Vitamins and Cofactors

Targeted quantification of water- and fat-soluble vitamins and cofactors, including B vitamins, vitamin D, retinoids and tocopherols.

Gut and Microbiome Metabolites

Targeted analysis of short-chain fatty acids, bile acid derivatives, indoles and volatile metabolites from gut and microbiome samples.

Untargeted Metabolomics

High-resolution LC–MS and GC–MS screening that detects thousands of metabolic features per sample, for novel biomarkers and unexpected pathway changes.

Environmental & Impact Combo

Combines fatty acids, bile acids and PFAS analysis to assess how environmental factors influence metabolism.

Method Development

Custom targets, custom LC–MS and GC–MS methods and isotope tracing workflows, developed and validated for your specific research question.

Combined Metabolomics Panels

Targeted and untargeted panels combined, with an untargeted screening of up to 400 metabolic features added to each combo.

Advanced data analysis by metabolomics experts

Our bioinformatics team performs complete data analysis so you can focus on interpreting biological meaning.

We handle all steps, from data filtering and normalization to statistical testing, modeling, and visualization, ensuring accuracy, reproducibility, and publication-ready results.

Integrate your metabolomics data for deeper insights

Combine your metabolomics results with other datasets such as genomics, proteomics, or clinical data. Our data integration services and AI-supported analytics reveal hidden relationships between molecular systems, bringing context and clarity to complex biological questions.

Delivery, post-consultation and discussion

At the conclusion of your metabolomics analysis, we ensure a seamless transition from discovery to application. We deliver detailed reports and data, followed by a post-delivery consultation to discuss your study's insights and findings.

What to expect during post-consultation

Explanation of the different steps in the sample analysis
Discussion of the data
Explanation of the different steps in the data analysis
Q&A to the report(s)

Together, we ensure that you have the best prerequisite for your further research. The consultation can also be used to explore the next step, whether you are looking to expand the project with additional omics studies or validate the results.

Get Started Today