Plant-based Proteomics

Precision Proteomics Services


At Biogenity, we apply plant proteomics to uncover the molecular mechanisms behind growth, stress responses, nutrition, and allergen biology, supporting advances in sustainable agriculture, plant science, and biotechnology.

Plants science is essential, and many industries depend on plant biology, technology, ecology, and evolution. As a vital source for nutrients in our diet, sustainable agriculture and allergens research is critical. Proteomics provides a unique insight, as it can reveal biological mechanisms helping you understand plant biology such as stress response, development, physiology, and modulate synthetic biology. Proteomics also provides tools to investigate digestion systems, e.g., targeting digestive bi-products of the common allergen gluten.

If you’d like to learn more, we are happy to discuss your project and help you get the most out of your plant-based proteomics analysis.


Let’s discuss your project


Several SOPs
for plant protein extraction


Your own extracts
welcome, handled with care


Interactive plots
enriched signaling pathways

Guiding you from sample to biology

At Biogenity, we understand that plant-based proteomics research is a sophisticated field that demands precision, expertise, and a tailored approach. Our team of proteomics experts is dedicated to guiding you through every step of your study, ensuring your project not only succeeds but also contributes to your scientific venture.



Get a free consultation

We invite you to an online consultation, during which we can address your questions and offer an expert assessment of how our plant-based proteomics strategies can be customized to meet your research goals.


Sample preparation and sample analysis

Sample preparation for plant-based proteomics

When working with plants, the research aim can be very different, e.g., modeling a biological mechanism driving a synthetic biology system or investigating the digestion of gluten. Proteomics offers various approaches with different targets, opportunities, and limitations. In our initial meeting, to learn about your aim and explore the options, we can provide you with the different approaches pros and cons to ensure that the aim and analytic method align.

Proteins extraction from plant studies is not always trivial. Biogenity offers several Standard Operating Procedures to ensure the proper method for the plant-based material. We are also happy to receive the protein extract if you have your preferred protein extraction methods. We will handle your samples with care and give you complete transparency so you know what methods have been used.

LC-MS/MS for plant proteomes

Your plant samples are analyzed on state-of-the-art mass spectrometers from Thermo Fisher Scientific, ensuring deep proteome coverage whether you study growth, stress responses, nutrition or allergen biology.

We guide you around the instrument options, so you only pay for the sensitivity your study needs.

Data analysis, including report, figures, and tables

Visualisation of your plant proteomics

Data analysis is where you get your overview. You will receive an easy-to-follow report describing the data analysis of your plant-based proteomics samples and results hereof, step-by-step, together with a folder containing all tables and figures. To ensure that you have the material needed, we always provide a vast number of figures and tables.



Interactive plots to highlight signaling pathways

With our bioinformatic data analysis, you will also get interactive plots that allow you to explore the signaling pathways that are enriched in your data. It lets you take the regulated proteins into perspective, showing which biological pathways or biological processes are potentially up or down-regulated. This helps you get a good understanding of what is happening in the different conditions.

Delivery and discussion

Delivery, post-consultation and discussion

At the conclusion of our plant-based proteomics analysis, we ensure a seamless transition from discovery to application. We deliver detailed reports and data, followed by a post-delivery consultation to discuss your study's insights and findings.


What to expect during post-consultation:

  • Explanation of the different steps in the sample analysis
  • Discussion of the data
  • Explanation of the different steps in the data analysis
  • Q&A to the report(s)

Together, we ensure that you have the best prerequisite for your further research. The consultation can also be used to explore the next step, whether you are looking to expand the project with additional omics studies or validate the results.


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